STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR98976.1Hypothetical protein. (305 aa)    
Predicted Functional Partners:
SIR98951.1
3-hydroxybutyryl-CoA dehydrogenase.
     0.985
SIR98962.1
Ketoreductase RED1.
     0.976
SIR78577.1
Hypothetical protein.
  
 
   0.839
SIR79047.1
Type VII secretion integral membrane protein EccD.
    
   0.801
SIR98987.1
Hypothetical protein.
       0.768
SIS23402.1
Animal haem peroxidase.
  
  0.757
SIS23436.1
Acetoacetate decarboxylase (ADC).
  
     0.730
SIR93206.1
Cutinase.
  
  
  0.707
SIR79061.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.705
SIR86114.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.705
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.