STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS00434.1Transcriptional regulator, MarR family. (392 aa)    
Predicted Functional Partners:
SIR86357.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
 0.929
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.733
SIS20744.1
Glucokinase.
  
  
 
0.725
SIR86698.1
Polyphosphate glucokinase.
     
 0.711
SIR74135.1
Aldose 1-epimerase.
 
  
 0.705
SIS00409.1
Adenosine kinase.
  
 
 0.699
SIS20181.1
Glutamate synthase (NADH) large subunit.
     
 0.685
SIS21515.1
Glutamate synthase (NADH) large subunit.
     
 0.685
SIR67156.1
Hypothetical protein.
  
 
  0.682
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.677
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.