STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS07734.1Hypothetical protein. (564 aa)    
Predicted Functional Partners:
SIS07858.1
EDD domain protein, DegV family.
   0.989
SIS07744.1
ATP-dependent DNA helicase RecG.
  
    0.922
SIR95396.1
NagD protein; Belongs to the HAD-like hydrolase superfamily.
      
 0.764
SIS07751.1
Protein of unknown function.
       0.754
rpmB-2
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
       0.630
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
       0.521
SIS07768.1
AAA domain (dynein-related subfamily).
       0.521
SIS07783.1
Hypothetical protein.
       0.521
SIR80492.1
Cell wall-associated hydrolase, NlpC family.
  
   
 0.512
SIS12633.1
Cell division septum initiation DivIVA, interacts with FtsZ, MinD.
 
     0.484
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.