STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS12297.1Maleate isomerase. (389 aa)    
Predicted Functional Partners:
SIS12285.1
Polysaccharide deacetylase.
 
     0.894
SIR80396.1
Succinate dehydrogenase subunit A.
   
 
  0.696
SIS12275.1
DNA-binding transcriptional regulator, GntR family.
       0.641
SIS10994.1
Putative urate catabolism protein.
  
     0.454
SIS12305.1
S-formylglutathione hydrolase FrmB.
       0.447
SIR69336.1
Nicotinamidase-related amidase.
    
 0.430
SIS23705.1
Nicotinamidase/pyrazinamidase.
    
 0.430
SIR81009.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 
  
 0.423
SIR88510.1
Uncharacterized protein, RmlC-like cupin domain.
  
     0.400
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.