STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS15413.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (360 aa)    
Predicted Functional Partners:
SIS15395.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.997
SIS15400.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.996
SIR81724.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.993
SIR81734.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.992
SIR95477.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.992
SIS15409.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.992
SIR95465.1
Sorbitol/mannitol transport system permease protein.
 
 0.991
SIR81713.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.968
SIR95453.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
 0.948
SIR60791.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
  0.798
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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