STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS20811.1AsnC family protein. (91 aa)    
Predicted Functional Partners:
SIS20803.1
DNA polymerase-3 subunit epsilon.
       0.805
SIR86568.1
Acyl-CoA synthetase (NDP forming).
 
  
  0.647
SIS10773.1
uroporphyrinogen-III C-methyltransferase.
  
 
 0.593
SIS20800.1
Hypothetical protein; Manually curated.
       0.454
SIR66045.1
Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated.
  
     0.449
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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