STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS21976.1P-loop protein of unknown function. (426 aa)    
Predicted Functional Partners:
SIS21979.1
PglZ domain-containing protein.
 
     0.954
SIS21981.1
Hypothetical protein.
 
     0.954
SIS21986.1
N-6 DNA Methylase.
 
     0.954
SIS21988.1
Serine/threonine protein kinase.
 
     0.954
SIR75954.1
ABC-type methionine transport system, permease component.
  
 0.953
SIS22609.1
D-methionine transport system permease protein.
  
 0.953
SIS21973.1
ATP-dependent helicase Lhr and Lhr-like helicase.
 
     0.951
SIR75937.1
Lipoprotein, YaeC family.
  
 0.934
SIS22620.1
D-methionine transport system substrate-binding protein.
  
 0.934
SIS21984.1
Uncharacterized conserved protein, contains ParB-like and HNH nuclease domains.
       0.787
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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