STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS22170.1Cysteine desulfurase family protein, VC1184 subfamily. (398 aa)    
Predicted Functional Partners:
SIR88337.1
FeS assembly scaffold apoprotein IscU.
 
 0.969
SIR81184.1
Cysteine desulfuration protein SufE.
  
 0.898
SIS19357.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
   0.852
SIR88314.1
Iron-regulated ABC transporter ATPase subunit SufC.
 
  
 0.815
SIR88300.1
Iron-regulated ABC transporter permease protein SufD.
 
 
 0.776
SIR88289.1
Iron-regulated ABC transporter membrane component SufB.
 
 
 0.768
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.699
SIS08396.1
Hypothetical protein.
  
     0.691
SIS22164.1
Protein of unknown function.
       0.679
SIR65304.1
Hypothetical protein.
  
   
 0.645
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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