STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS22175.1Transcriptional regulator, MarR family. (197 aa)    
Predicted Functional Partners:
SIS02555.1
DNA-binding transcriptional regulator, MarR family.
  
     0.742
SIR86625.1
Superfamily II DNA or RNA helicase.
  
     0.614
SIS22172.1
Putative NAD(P)H quinone oxidoreductase, PIG3 family.
       0.594
SIR88729.1
Protein of unknown function.
  
     0.576
SIR65434.1
Protein of unknown function.
  
     0.485
SIR79563.1
DNA-binding transcriptional regulator, MarR family.
  
     0.455
SIR67707.1
Sugar phosphate isomerase/epimerase.
  
     0.402
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.