Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIR88757.1 | SIS22991.1 | SAMN05445060_1422 | SAMN05445060_4027 | Hypothetical protein. | Hypothetical protein. | 0.445 |
| SIR99285.1 | SIS22991.1 | SAMN05445060_2031 | SAMN05445060_4027 | YidC/Oxa1 family membrane protein insertase. | Hypothetical protein. | 0.412 |
| SIR99285.1 | rnpA | SAMN05445060_2031 | SAMN05445060_2029 | YidC/Oxa1 family membrane protein insertase. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.982 |
| SIR99285.1 | rsmG | SAMN05445060_2031 | SAMN05445060_2033 | YidC/Oxa1 family membrane protein insertase. | 16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.767 |
| SIS22991.1 | SIR88757.1 | SAMN05445060_4027 | SAMN05445060_1422 | Hypothetical protein. | Hypothetical protein. | 0.445 |
| SIS22991.1 | SIR99285.1 | SAMN05445060_4027 | SAMN05445060_2031 | Hypothetical protein. | YidC/Oxa1 family membrane protein insertase. | 0.412 |
| SIS22991.1 | rnpA | SAMN05445060_4027 | SAMN05445060_2029 | Hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.544 |
| SIS22991.1 | rsmG | SAMN05445060_4027 | SAMN05445060_2033 | Hypothetical protein. | 16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.783 |
| rnpA | SIR99285.1 | SAMN05445060_2029 | SAMN05445060_2031 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | YidC/Oxa1 family membrane protein insertase. | 0.982 |
| rnpA | SIS22991.1 | SAMN05445060_2029 | SAMN05445060_4027 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Hypothetical protein. | 0.544 |
| rnpA | rsmG | SAMN05445060_2029 | SAMN05445060_2033 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.832 |
| rsmG | SIR99285.1 | SAMN05445060_2033 | SAMN05445060_2031 | 16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | YidC/Oxa1 family membrane protein insertase. | 0.767 |
| rsmG | SIS22991.1 | SAMN05445060_2033 | SAMN05445060_4027 | 16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | Hypothetical protein. | 0.783 |
| rsmG | rnpA | SAMN05445060_2033 | SAMN05445060_2029 | 16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.832 |