STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A138ZWE0C2-C2_1 domain-containing protein. (406 aa)    
Predicted Functional Partners:
A0A139A4S2
Uncharacterized protein.
    
 0.830
A0A139AV60
SH3 domain-containing protein.
    
 0.764
A0A139A9A6
Rab11-1c.
   
  0.673
A0A139AUA2
P-loop containing nucleoside triphosphate hydrolase protein.
   
  0.673
A0A139AXN3
Uncharacterized protein.
    
  0.576
A0A139A111
Uncharacterized protein.
    
  0.555
A0A139A6N0
UPF0020 domain-containing protein.
    
  0.555
A0A139AHQ4
Putative ethylene-responsive small GTP-binding protein.
   
 
 0.555
A0A138ZY39
PHB domain-containing protein.
    
  0.554
A0A139A9N0
PHB domain-containing protein.
    
  0.554
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.