STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A138ZXK2Glycoside hydrolase family 7 protein. (412 aa)    
Predicted Functional Partners:
A0A139AIH5
Chromo domain-containing protein.
   
 0.889
A0A139A0W8
Histone-fold-containing protein.
   
 0.810
A0A139AFF1
Histone H3; Belongs to the histone H3 family.
   
 0.810
A0A139AKA6
Histone-fold-containing protein.
   
 0.810
A0A139A2I6
SET domain-containing protein.
    
 0.804
A0A139AQL5
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.785
A0A139ANN6
SET domain-containing protein.
     
 0.769
A0A138ZWJ1
Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.767
A0A139APC9
SET domain-containing protein.
     
 0.752
A0A139AMZ0
Glycoside hydrolase family 1 protein; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.751
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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