STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A138ZY08Nitroreductase family protein. (249 aa)    
Predicted Functional Partners:
A0A139A9T8
Alpha/beta hydrolase fold protein.
  
 
 0.771
A0A139AAU0
Alpha/beta-hydrolase.
  
 
 0.771
A0A139AGB0
Alpha/beta-hydrolase.
  
 
 0.771
A0A139ALE7
Alpha/beta-hydrolase.
  
 
 0.771
A0A139ATJ3
Alpha/beta-hydrolase.
  
 
 0.771
A0A139A678
Riboflavin kinase.
    
 0.761
A0A139A629
2Fe-2S ferredoxin-type domain-containing protein.
    
 0.744
A0A139ACY2
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
     
 0.735
A0A139AMJ6
Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
  
 
 0.723
A0A139A326
Siroheme synthase middle domains-like protein.
    
 0.719
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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