A0A138ZY36 protein (Gonapodya prolifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A138ZY36

ARM repeat-containing protein. (1074 aa)

Predicted Functional Partners:

A0A139AF68

0.712

A0A139AKJ6

0.709

A0A139A4B1

0.701

A0A139AVU1

0.701

A0A139AQZ6

0.666

A0A139AUJ1

0.666

A0A139A1R9

0.639

A0A139AWU7

0.620

A0A138ZZR4

0.611

A0A139AUZ5

0.611

Your Current Organism:

Gonapodya prolifera

NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A138ZY36	A0A138ZZR4	ARM repeat-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.611
A0A138ZY36	A0A139A1R9	ARM repeat-containing protein.	Uncharacterized protein.	0.639
A0A138ZY36	A0A139A4B1	ARM repeat-containing protein.	TPR-like protein.	0.701
A0A138ZY36	A0A139AF68	ARM repeat-containing protein.	EF-hand calcium-binding domain-containing protein 1-like protein.	0.712
A0A138ZY36	A0A139AKJ6	ARM repeat-containing protein.	TPR-like protein.	0.709
A0A138ZY36	A0A139AQZ6	ARM repeat-containing protein.	Uncharacterized protein.	0.666
A0A138ZY36	A0A139AUJ1	ARM repeat-containing protein.	Uncharacterized protein.	0.666
A0A138ZY36	A0A139AUZ5	ARM repeat-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.611
A0A138ZY36	A0A139AVU1	ARM repeat-containing protein.	RIB43A-domain-containing protein.	0.701
A0A138ZY36	A0A139AWU7	ARM repeat-containing protein.	Uncharacterized protein.	0.620
A0A138ZZR4	A0A138ZY36	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	ARM repeat-containing protein.	0.611
A0A138ZZR4	A0A139A1R9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.623
A0A138ZZR4	A0A139A4B1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	TPR-like protein.	0.404
A0A138ZZR4	A0A139AF68	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	EF-hand calcium-binding domain-containing protein 1-like protein.	0.464
A0A138ZZR4	A0A139AKJ6	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	TPR-like protein.	0.404
A0A138ZZR4	A0A139AQZ6	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.843
A0A138ZZR4	A0A139AVU1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	RIB43A-domain-containing protein.	0.702
A0A139A1R9	A0A138ZY36	Uncharacterized protein.	ARM repeat-containing protein.	0.639
A0A139A1R9	A0A138ZZR4	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.623
A0A139A1R9	A0A139A4B1	Uncharacterized protein.	TPR-like protein.	0.507