STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A138ZZ85Large subunit ribosomal protein L27. (87 aa)    
Predicted Functional Partners:
A0A139A1X4
Dbl homology domain-containing protein.
    
 0.999
A0A139ATN5
Uncharacterized protein.
    
 0.960
A0A139A3Y5
Adaptor protein complex AP-1 gamma subunit.
   
 0.935
A0A139ACE3
AP-2 complex subunit MU; Belongs to the adaptor complexes medium subunit family.
   
 0.931
A0A139ANL6
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.918
A0A138ZYM4
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.917
A0A139AKL0
Adaptor protein complex AP-3 delta subunit.
   
 0.881
A0A138ZXS6
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.865
A0A139AK65
Uncharacterized protein.
    
 0.865
A0A139A2P1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.861
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.