STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A138ZZF7Reelin domain-containing protein. (470 aa)    
Predicted Functional Partners:
A0A139AJ90
WD40 repeat-like protein.
   
 0.656
A0A138ZXM2
Ipi1_N domain-containing protein.
    
 0.644
A0A138ZY00
Uncharacterized protein.
    
  0.639
A0A138ZYS7
Uncharacterized protein.
    
  0.639
A0A139A340
Carbohydrate-binding module family 1 protein.
    
  0.639
A0A139A997
Uncharacterized protein.
    
  0.639
A0A139AQ51
Uncharacterized protein.
    
  0.639
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.561
A0A139A334
Uncharacterized protein.
    
 0.538
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.533
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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