A0A138ZZR9 protein (Gonapodya prolifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A138ZZR9

BAR-domain-containing protein. (263 aa)

Predicted Functional Partners:

A0A138ZZM5

0.897

A0A139AXQ1

0.890

A0A139ANL6

0.851

A0A139A4G9

0.773

A0A139AR38

0.752

A0A139A5Y9

0.727

A0A139A8P6

0.727

A0A139AW71

0.727

A0A139A4V0

0.719

A0A139ACX7

0.719

Your Current Organism:

Gonapodya prolifera

NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A138ZZM5	A0A138ZZR9	BAR-domain-containing protein.	BAR-domain-containing protein.	0.897
A0A138ZZM5	A0A139A4G9	BAR-domain-containing protein.	FCH domain-containing protein.	0.708
A0A138ZZM5	A0A139A4V0	BAR-domain-containing protein.	Uncharacterized protein.	0.739
A0A138ZZM5	A0A139A5Y9	BAR-domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.625
A0A138ZZM5	A0A139A8P6	BAR-domain-containing protein.	Putative sorting protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.650
A0A138ZZM5	A0A139ACX7	BAR-domain-containing protein.	F-BAR domain-containing protein.	0.712
A0A138ZZM5	A0A139ANL6	BAR-domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.835
A0A138ZZM5	A0A139AR38	BAR-domain-containing protein.	Uncharacterized protein.	0.975
A0A138ZZM5	A0A139AW71	BAR-domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.650
A0A138ZZM5	A0A139AXQ1	BAR-domain-containing protein.	BAR domain-containing protein.	0.663
A0A138ZZR9	A0A138ZZM5	BAR-domain-containing protein.	BAR-domain-containing protein.	0.897
A0A138ZZR9	A0A139A4G9	BAR-domain-containing protein.	FCH domain-containing protein.	0.773
A0A138ZZR9	A0A139A4V0	BAR-domain-containing protein.	Uncharacterized protein.	0.719
A0A138ZZR9	A0A139A5Y9	BAR-domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.727
A0A138ZZR9	A0A139A8P6	BAR-domain-containing protein.	Putative sorting protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.727
A0A138ZZR9	A0A139ACX7	BAR-domain-containing protein.	F-BAR domain-containing protein.	0.719
A0A138ZZR9	A0A139ANL6	BAR-domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.851
A0A138ZZR9	A0A139AR38	BAR-domain-containing protein.	Uncharacterized protein.	0.752
A0A138ZZR9	A0A139AW71	BAR-domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.727
A0A138ZZR9	A0A139AXQ1	BAR-domain-containing protein.	BAR domain-containing protein.	0.890