STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A046PLP-dependent transferase. (498 aa)    
Predicted Functional Partners:
A0A139ABW0
PLP-dependent transferase.
 
0.982
A0A139AHH2
Serine palmitoyltransferase.
  
0.976
A0A139ATM5
ORMDL-domain-containing protein.
    
 
 0.950
A0A139A246
Short chain dehydrogenase/ reductase.
     
 0.873
A0A139A6K2
CDP-diacylglycerol-serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.855
A0A139A2J5
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.836
A0A139ANQ1
Tryptophan synthase.
    
 0.832
A0A139ASW3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.773
A0A139AXV3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.773
A0A139B0H7
Putative serine racemase.
   
 0.773
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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