STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A0L2Uncharacterized protein. (547 aa)    
Predicted Functional Partners:
A0A139AS31
PCI-domain-containing protein.
   
 0.986
A0A139ALZ4
FUSCA protein FUS6.
   
 0.984
A0A139AZB7
Putative JUN activation binding protein variant 2.
   
 0.979
A0A139APH7
MGC97656 protein-like protein.
   
 0.978
A0A139AQ14
Mov34-domain-containing protein.
   
 0.975
A0A139ASQ4
PCI domain-containing protein.
    
 0.954
A0A139AJK9
Outer arm dynein light chain 1.
   
 0.933
A0A139AUM6
Cullin-domain-containing protein; Belongs to the cullin family.
   
  0.924
A0A139AT33
Ubiquitin.
    
 0.873
A0A139ALV0
RING/U-box.
   
  0.869
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.