STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A0X3Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (349 aa)    
Predicted Functional Partners:
A0A139B160
Uncharacterized protein.
 
 0.991
A0A139AMJ6
Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
  
 0.982
A0A139ACY8
Tetrapyrrole methylase.
 
 
 0.921
A0A139A3B4
Uncharacterized protein.
  
 
 0.892
A0A139B0U1
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
    
 0.876
A0A139A326
Siroheme synthase middle domains-like protein.
    
 0.841
A0A139A2C7
Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.831
A0A139AF52
PLP-dependent transferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.777
A0A139A046
PLP-dependent transferase.
    
 0.747
A0A139ABW0
PLP-dependent transferase.
    
 0.747
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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