STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A1S1O-acetylhomoserine sulfhydrylase. (616 aa)    
Predicted Functional Partners:
A0A139ANQ1
Tryptophan synthase.
  
 
 0.823
A0A139AU08
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.811
A0A139ARA1
Cobalamin-independent methionine synthase.
  
 
 0.746
A0A139AR89
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.742
A0A139AUP3
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.742
A0A139AY10
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 0.742
A0A139AC82
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
 
 0.741
A0A139AQI0
Homocysteine S-methyltransferase.
  
 
 0.741
A0A139AR35
Pyridoxal phosphate-dependent enzyme, beta subunit.
 
 0.741
A0A139AU43
Cysteine synthase.
 
 0.741
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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