STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A324RING-type domain-containing protein. (405 aa)    
Predicted Functional Partners:
A0A139AEC3
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.709
A0A139B0U7
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.700
A0A139AML8
Putative ubiquitin.
    
  0.676
A0A139AWK4
NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30.
    
  0.676
A0A139AWM1
CIA30-domain-containing protein.
    
  0.676
A0A139A7L8
Uncharacterized protein.
    
 0.669
A0A139ADT6
Uncharacterized protein.
    
 0.669
A0A138ZXE7
Polyubiquitin 5.
    
  0.663
A0A139AFA0
Ubiqutin ligase-like protein.
    
  0.663
A0A139AG64
Ubiquitin.
    
  0.663
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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