STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A3T2Phenylalanine-tRNA ligase. (496 aa)    
Predicted Functional Partners:
A0A139AYB9
Phenylalanyl-tRNA synthetase.
  
 0.999
A0A139ATF1
Serine-tRNA ligase.
  
 
 0.863
A0A139B0B6
Tyrosine--tRNA ligase.
  
 
 0.856
A0A139A254
Phenylalanyl-tRNA synthetase.
   
 
0.811
A0A139A809
Uncharacterized protein.
  
  
 0.809
A0A139A433
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.761
A0A139A287
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.735
A0A139AWY6
P-loop containing nucleoside triphosphate hydrolase protein.
  
   0.727
A0A139AXV8
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.704
A0A139ASI2
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.697
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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