STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A434Heat shock protein. (793 aa)    
Predicted Functional Partners:
A0A139AXC2
SGS-domain-containing protein.
    
 0.999
A0A139ACR8
Hsp70-like protein; Belongs to the heat shock protein 70 family.
 
 0.989
A0A138ZZT1
HSP20-like chaperone.
   
 0.949
A0A139A2T3
Actin-like ATPase domain-containing protein.
  
 0.949
A0A139AU05
Chord-domain-containing protein.
   
 0.943
A0A139A618
Calreticulin-domain-containing protein.
   
 
 0.931
A0A139AB28
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
   
 0.923
A0A139AM17
Rap-GAP domain-containing protein.
    
 0.913
A0A139AQ81
Aha1_N domain-containing protein.
   
 
 0.911
A0A139A5N7
TPR-like protein.
  
 0.909
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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