STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A4P0Helicase ATP-binding domain-containing protein. (934 aa)    
Predicted Functional Partners:
A0A138ZYX0
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 
 0.763
A0A139AJS9
HMG box domain-containing protein.
   
 0.735
A0A139AR75
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.726
A0A139AR02
Uncharacterized protein.
   
 0.725
A0A139A737
Actin-like ATPase domain-containing protein; Belongs to the actin family.
    
 0.724
A0A139B0D4
RNA polymerase Rpb6.
   
 0.716
A0A139ATW4
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.711
A0A139AJD0
Retinoblastoma binding protein-like protein 4 variant.
    
 0.679
A0A139AFD8
ARM repeat-containing protein.
   
  0.673
A0A139AIK6
DRMBL domain-containing protein.
  
 0.673
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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