STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A8H6Glycoside hydrolase family 125 protein. (488 aa)    
Predicted Functional Partners:
A0A139ATP6
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.682
A0A139APN2
Uncharacterized protein.
    
 0.658
A0A139AZR1
Uncharacterized protein.
    
  0.550
A0A139AQG0
PLP-dependent transferase.
 
      0.528
A0A138ZY00
Uncharacterized protein.
   
  0.520
A0A138ZYS7
Uncharacterized protein.
   
  0.520
A0A139A340
Carbohydrate-binding module family 1 protein.
   
  0.520
A0A139A997
Uncharacterized protein.
   
  0.520
A0A139AQ51
Uncharacterized protein.
   
  0.520
A0A139AUT3
ZZ-type domain-containing protein.
   
  0.506
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.