STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A8S7LITAF domain-containing protein. (175 aa)    
Predicted Functional Partners:
A0A139ATW4
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.981
A0A138ZXL7
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.781
A0A139ANA2
Nucleic acid-binding protein.
   
 0.772
A0A139AJD0
Retinoblastoma binding protein-like protein 4 variant.
    
 0.723
A0A139AZN4
SAS-6_N domain-containing protein.
    
 0.705
A0A139AWU1
Uncharacterized protein.
    
 0.692
A0A139AXZ4
dUTP diphosphatase.
    
 0.692
A0A139APN2
Uncharacterized protein.
    
 0.683
A0A139AEC5
Uncharacterized protein.
    
 0.657
A0A139A8W4
Pyruvate formate lyase.
    
 0.654
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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