STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A9F7Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
A0A139AUB9
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
    
 0.790
A0A139AA75
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
 0.759
A0A139AIB9
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
    
 0.759
A0A139AR68
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.758
A0A139A205
Farnesyl-diphosphate farnesyltransferase.
     
 0.745
A0A139A3L7
Uncharacterized protein.
   
 
 0.742
A0A139A2L8
Uncharacterized protein.
     
 0.654
A0A139B1E3
Uncharacterized protein.
     
 0.654
A0A139AKA8
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
 
      0.515
A0A139AY39
UFD1-domain-containing protein.
 
      0.491
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.