STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AAW1RING-type domain-containing protein. (831 aa)    
Predicted Functional Partners:
A0A139AVY4
Uncharacterized protein.
   
 
 0.660
A0A139A1F6
Uncharacterized protein.
   
 
 0.642
A0A139A5E8
Sec63-domain-containing protein.
    
 
 0.637
A0A139AVM9
S10_plectin domain-containing protein.
    
 
 0.630
A0A139AS68
Ribosomal protein S1.
    
 
 0.623
A0A139AP15
GYF domain-containing protein.
    
 
 0.612
A0A139B0F9
Guanine nucleotide binding protein beta subunit.
    
 
 0.605
A0A139A5F5
RING-type domain-containing protein.
    
 
 0.604
A0A139ADS0
Putative Angio-associated migratory cell protein.
 
      0.562
A0A139AQ42
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
    0.554
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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