STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AAX7Centrin 1. (179 aa)    
Predicted Functional Partners:
A0A139A9Z4
Rad4-domain-containing protein.
    
 0.936
A0A139ATP6
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.840
A0A139AQ63
Uncharacterized protein.
    
 
 0.813
A0A139AUR4
Uncharacterized protein.
    
 
 0.801
A0A139ARP8
UV excision repair protein Rad23.
   
 0.794
A0A139AZW3
Uncharacterized protein.
   
 
 0.786
A0A139AFN9
TPR-like protein.
    
 0.757
A0A139AWG9
Nucleoside diphosphate kinase; Belongs to the NDK family.
   
 
 0.734
A0A138ZXV7
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
   
 0.719
A0A139APM2
Uncharacterized protein.
   
 0.714
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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