STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139ABE4Phosphoglycerate mutase-like protein. (202 aa)    
Predicted Functional Partners:
A0A139AN02
Lysophospholipase.
    
 0.748
A0A138ZYK6
GDPD-domain-containing protein.
    
  0.708
A0A139A015
Uncharacterized protein.
   
   0.665
A0A139AMI5
Uncharacterized protein.
   
 0.643
A0A139A2N2
Putative 60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.621
A0A139A1X4
Dbl homology domain-containing protein.
    
  0.617
A0A139AND5
Ribosomal_L2_C domain-containing protein.
   
 
 0.589
A0A139AYK9
Ribosomal protein L2.
   
 
 0.583
A0A139A7L8
Uncharacterized protein.
    
  0.570
A0A139ADT6
Uncharacterized protein.
    
  0.570
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.