STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AC07RRM domain-containing protein. (418 aa)    
Predicted Functional Partners:
A0A139APA2
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
  0.864
A0A139AC44
ARM repeat-containing protein.
    
 0.692
A0A138ZYJ2
Nuclear cap-binding protein subunit 2.
    
 0.688
A0A139AEA0
eIF4AIII; Belongs to the DEAD box helicase family.
   
 0.677
A0A139AGY9
Matrin-type domain-containing protein.
    
 0.670
A0A139A6G9
Tr-type G domain-containing protein.
   
 0.661
A0A139A7M7
S1 motif domain-containing protein.
   
 0.651
A0A139ALA2
DNA-directed RNA polymerases I.
   
  0.650
A0A139AAV1
RPOL4c domain-containing protein.
    
 0.648
A0A139ASS7
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.645
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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