STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AC86Uncharacterized protein. (417 aa)    
Predicted Functional Partners:
A0A139A3K3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.973
A0A139AS71
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.964
A0A139AS95
Uncharacterized protein.
   
 
 0.956
A0A138ZXX3
Utp12 domain-containing protein.
   
   0.952
A0A139A2G7
Brix-domain-containing protein.
   
 
 0.950
A0A139AYA7
Sas10 domain-containing protein.
   
   0.946
A0A139A3A7
Uncharacterized protein.
   
   0.945
A0A139AKQ6
Bystin-domain-containing protein.
   
   0.942
A0A139A823
Alpha-L RNA-binding motif-containing protein.
   
   0.934
A0A139AAC3
Uncharacterized protein.
   
   0.934
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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