STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139ADR7Amino acid transporter. (513 aa)    
Predicted Functional Partners:
A0A139API9
Nudix hydrolase domain-containing protein.
   
  0.628
A0A139AV69
Uncharacterized protein.
   
  0.628
A0A139AV93
Uncharacterized protein.
   
  0.628
A0A139ADA8
Glycoside hydrolase family 13 protein; Belongs to the glycosyl hydrolase 13 family.
   
 0.600
A0A139ALC5
IGPS-domain-containing protein.
   
 
 0.569
A0A139AEU5
Shikimate 5-dehydrogenase.
   
 0.495
A0A139AXG6
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
   
 0.495
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.