STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AEP6DUF2236 domain-containing protein. (475 aa)    
Predicted Functional Partners:
A0A139AZH4
JmjC domain-containing protein.
    
 0.946
A0A139A478
Uncharacterized protein.
    
 
 0.932
A0A139AU52
Uncharacterized protein.
    
 
 0.932
A0A139AUX5
JmjC-domain-containing protein.
    
 0.872
A0A139AJS9
HMG box domain-containing protein.
   
 0.870
A0A139AJD0
Retinoblastoma binding protein-like protein 4 variant.
   
 0.865
A0A139A2I6
SET domain-containing protein.
   
 0.860
A0A139APC9
SET domain-containing protein.
   
 0.857
A0A139AR02
Uncharacterized protein.
   
 0.849
A0A138ZX03
Histone H2B; Belongs to the histone H2B family.
   
 0.847
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.