STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AGD2Cytidine deaminase-like protein. (224 aa)    
Predicted Functional Partners:
A0A139ABS9
CMP/dCMP-type deaminase domain-containing protein.
   
 0.848
A0A139AA47
Thymidylate synthase.
  
 
 0.674
A0A139A687
VOC domain-containing protein.
   
 
  0.559
A0A139A6A0
VOC domain-containing protein.
   
 
  0.559
A0A139A8J1
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase.
   
 
  0.559
A0A139ACP4
Glyoxalase domain-containing protein.
   
 
  0.559
A0A139AG89
IU_nuc_hydro domain-containing protein.
   
 0.543
A0A139A6D9
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
   
 0.540
A0A139AI61
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.530
A0A139A5Y3
Thymidylate_kin domain-containing protein.
    
 0.523
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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