STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AH42D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (478 aa)    
Predicted Functional Partners:
A0A138ZZK1
Putative phosphoserine aminotransferase.
 
 0.928
A0A139A8R0
Phosphoserine aminotransferase.
 
 0.927
A0A139ANQ1
Tryptophan synthase.
  
 0.890
A0A139A8Q8
Uncharacterized protein; Belongs to the cytochrome b5 family.
  
 
 0.763
A0A139APE2
Alpha/beta-hydrolase.
  
 0.759
A0A139A8T0
P-loop containing nucleoside triphosphate hydrolase protein.
     
 0.722
A0A139ARD9
Phosphoglycerate mutase-like protein.
   
 0.720
A0A139A9N7
Cofactor-independent phosphoglycerate mutase.
    
 0.717
A0A139AMX8
Phosphoglycerate mutase-like protein.
   
 0.696
A0A139AUM4
Acetolactate synthase.
  
 
 0.680
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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