STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AHT0RNA-binding domain-containing protein. (212 aa)    
Predicted Functional Partners:
A0A139AFD8
ARM repeat-containing protein.
    
 0.999
A0A139ARR4
CPSF_A domain-containing protein.
   
 0.999
A0A139ASF3
DUF382-domain-containing protein.
   
 0.999
A0A138ZZS8
Splicing factor 3A subunit 2-like protein.
   
 0.998
A0A138ZZX9
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.998
A0A139ACB3
PHF5-like protein.
    
 0.998
A0A139AYA3
RNA-binding domain-containing protein.
    
 0.998
A0A139AEB1
Matrin-type domain-containing protein.
    
 0.997
A0A139ATA8
LRRcap domain-containing protein.
    
 0.996
A0A139ANW6
Sm-like ribonucleo protein.
    
 0.994
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.