STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AIZ2Farnesyltransferase, CAAX box, alpha. (310 aa)    
Predicted Functional Partners:
A0A139AJD7
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.999
A0A139A761
Geranylgeranyltransferase type I beta-subunit-like protein.
    
 0.997
A0A139AXZ9
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.866
A0A139AF98
Abi-domain-containing protein.
     
 0.862
A0A139AIB9
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
     
 0.853
A0A139AR68
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.853
A0A139AA75
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.851
A0A139A205
Farnesyl-diphosphate farnesyltransferase.
     
 0.826
A0A139A2Q5
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
 
    
 0.813
A0A139AUB9
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
     
 0.795
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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