STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AK01HIRA-interacting protein 5. (213 aa)    
Predicted Functional Partners:
A0A139AG16
Mitochondrial cysteine desulfurase.
  
 0.940
A0A139AL46
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.912
A0A139AET2
PLP-dependent transferase.
  
 0.909
A0A139AT25
Cysteine desulfurase.
  
 0.909
A0A139ANF3
NADH-quinone oxidoreductase.
  
  
 0.868
A0A139ANM8
Fe-S_biosyn domain-containing protein.
  
 
 0.851
A0A139ALC7
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
   
    0.838
A0A139AHN7
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 
 0.825
A0A139AW16
Frataxin.
   
  
 0.715
A0A139AVY3
Amidophosphoribosyltransferase.
    
 0.704
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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