STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139ALF4HCP-like protein. (857 aa)    
Predicted Functional Partners:
A0A138ZZW5
PRKCSH domain-containing protein.
    
 0.658
A0A139AFK9
RING-type domain-containing protein.
    
 0.508
A0A139AVT7
RING-type domain-containing protein.
    
 0.502
A0A139A3N1
HCP-like protein.
  
     0.479
A0A139AZ28
RNI-like protein.
  
     0.475
A0A139B164
RING-type domain-containing protein.
     
 0.475
A0A139A115
Uncharacterized protein.
   
  0.439
A0A139A282
Uncharacterized protein.
   
  0.439
A0A139AIR9
Uncharacterized protein.
   
  0.439
A0A139AJR8
Uncharacterized protein.
   
  0.439
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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