STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AMH6Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (920 aa)    
Predicted Functional Partners:
A0A139A112
Uncharacterized protein.
   
 0.999
A0A139A5F8
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
   
 0.999
A0A139AKD6
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
   
 0.999
A0A139AST7
Peptidase S59 domain-containing protein.
   
 0.999
A0A139AMA8
NIC-domain-containing protein.
   
 0.997
A0A139ARH7
Nucleoporin-domain-containing protein.
   
 0.992
A0A138ZZW3
Nsp1_C domain-containing protein.
   
 0.991
A0A139A9W5
Uncharacterized protein.
    
 0.979
A0A139AJ96
Uncharacterized protein.
    
 0.972
A0A139AM53
Uncharacterized protein.
   
 0.971
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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