STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AMK3Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
A0A139AJS9
HMG box domain-containing protein.
    
  0.983
A0A139ANQ1
Tryptophan synthase.
    
 0.782
A0A139A205
Farnesyl-diphosphate farnesyltransferase.
   
 
 0.745
A0A139AY92
Uncharacterized protein.
    
 0.738
A0A139AUX5
JmjC-domain-containing protein.
   
 0.713
A0A139AJD0
Retinoblastoma binding protein-like protein 4 variant.
    
 0.709
A0A139AJ94
TPR_REGION domain-containing protein.
    
 0.698
A0A139A2I7
HMG box domain-containing protein.
    
  0.625
A0A139AIV0
HMG box domain-containing protein.
    
  0.625
A0A139ASZ5
High mobility group box.
    
  0.625
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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