STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AMK9POZ domain-containing protein; Belongs to the SKP1 family. (102 aa)    
Predicted Functional Partners:
A0A139ANM0
Uncharacterized protein.
   
 0.999
A0A139AUM6
Cullin-domain-containing protein; Belongs to the cullin family.
   
 0.999
A0A139ALM4
Uncharacterized protein.
    
 0.998
A0A139ALV0
RING/U-box.
   
 0.998
A0A139AT33
Ubiquitin.
   
 0.965
A0A139AZB7
Putative JUN activation binding protein variant 2.
   
 0.946
A0A139ALZ4
FUSCA protein FUS6.
    
  0.934
A0A139A6E7
RNI-like protein.
    
 0.922
A0A139ADT2
RNI-like protein.
    
 0.922
A0A139AJK9
Outer arm dynein light chain 1.
   
 0.894
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.