STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AMY7SprT-like domain-containing protein. (170 aa)    
Predicted Functional Partners:
A0A139ANU1
Brf1-Tbp-Dna ternary complex.
    
 0.833
A0A139ALJ0
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
 
      0.778
A0A139AB20
HIT-like protein.
    
 0.774
A0A139A5M1
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.741
A0A139AQ12
HIT-like protein.
    
 0.720
A0A139APQ2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.707
A0A139A2S4
Uncharacterized protein.
     
 0.686
A0A139AQW9
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.682
A0A139A5H8
Uncharacterized protein.
   
 
  0.653
A0A139AJD0
Retinoblastoma binding protein-like protein 4 variant.
   
  0.624
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.