STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AQS3WD40 repeat-like protein. (518 aa)    
Predicted Functional Partners:
A0A139A5B8
WD40 repeat-like protein.
   
 
 0.821
A0A139A5N6
TPR-like protein.
   
    0.714
A0A139AZU2
RRM domain-containing protein.
   
   0.664
A0A139AYU7
DEAD-domain-containing protein.
   
   0.663
A0A139AMF5
RNA helicase.
   
   0.607
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.577
A0A139AV54
Uncharacterized protein.
   
    0.558
A0A139AKA5
DEAD box RNA helicase; Belongs to the DEAD box helicase family.
   
   0.550
A0A139A3K3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
    0.545
A0A139AJ90
WD40 repeat-like protein.
   
    0.542
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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