STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139ASF9Uncharacterized protein. (302 aa)    
Predicted Functional Partners:
A0A139AWE5
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.998
A0A139ATI6
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.990
A0A138ZYX0
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
    
 0.982
A0A139ASR6
BRCA-2_helical domain-containing protein.
   
 0.968
A0A139ATW4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.946
A0A139AR24
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.931
A0A138ZXL7
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
  
 0.928
A0A139AJT7
Uncharacterized protein.
    
 0.913
A0A139ARZ2
Uncharacterized protein.
  
 0.898
A0A139AYN0
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.898
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.