STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139ASM9RNA-binding domain-containing protein. (880 aa)    
Predicted Functional Partners:
A0A139A2G7
Brix-domain-containing protein.
   
   0.989
A0A139ATU5
WD40 repeat-like protein.
   
 
 0.956
A0A139ASY6
Uncharacterized protein.
   
 
0.941
A0A139A3A7
Uncharacterized protein.
   
 
 0.931
A0A139A5B8
WD40 repeat-like protein.
   
  
 0.920
A0A139AKQ6
Bystin-domain-containing protein.
   
 
 0.920
A0A139ASC9
RNA helicase.
   
 
 0.916
A0A139AYG6
Nucleic acid-binding protein.
   
   0.916
A0A139AWY6
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.915
A0A139A0A7
YVTN repeat-like/Quino protein amine dehydrogenase.
   
 
 0.912
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.