STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139ASP8APC1_C domain-containing protein. (1817 aa)    
Predicted Functional Partners:
A0A138ZXZ0
RING/U-box.
    
 0.999
A0A139A862
Galactose-binding like protein.
    
 0.999
A0A139AGS7
Uncharacterized protein.
   
 0.999
A0A139AK18
TPR-like protein.
    
 0.999
A0A139AL22
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.999
A0A139AMH4
TPR-like protein.
   
 0.999
A0A139AX80
Anaphase-promoting complex subunit Apc8.
   
 0.999
A0A139AY81
Uncharacterized protein.
   
 0.999
A0A139AZE1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.995
A0A139ARF3
UBC-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.993
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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