STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139ATL2MutL-like protein 1, colon cancer, nonpolyposis type 2. (747 aa)    
Predicted Functional Partners:
A0A139AM15
Uncharacterized protein.
  
 
0.999
A0A139AW63
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.995
A0A139A667
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.993
A0A139A3C3
Uncharacterized protein.
  
 
0.991
A0A139ASK4
PIN domain-like protein.
   
 0.987
A0A138ZZR3
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.985
A0A139A5T6
DNA_mis_repair domain-containing protein.
  
 
0.977
A0A139A5C5
MutL_C domain-containing protein.
    
 0.973
A0A139AM86
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.969
A0A139AK82
Helicase ATP-binding domain-containing protein.
   
 0.945
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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